Bayesian regression for
multi-level machine-learned potentials
Subproject P03
The first-principles description of the properties of multi-component metal oxides is an exceedingly challenging problem. The reasons are that the configurational space grows exponentially with the number of species and standard Density Functional Theory (DFT) is often not accurate enough. The long-term objective of P03 is to accelerate first-principles calculations by developing machine-learning approaches for the description of the interatomic forces, Born effective charges, and other tensorial properties of multivalent oxides. The project will rely on kernel-based methods and Bayesian inference to implement fully automatic “on-the-fly” learning.
In the first project period, we will develop machine-learned force fields (MLFF) for DFT and DFT+U, whereby the number of components in the FF will be gradually increased. A concise framework for learning tensorial properties will be implemented. We will use this to simulate infrared spectra of oxide materials, which can be readily compared to the finite-temperature spectra measured by the experimental groups.
The difference between DFT and hybrid functionals will be machine-learned to go beyond semi-local functionals (Delta-learning). The long-term perspective is to extend this approach to highly accurate beyond-DFT methods, such as the random phase approximation and quantum chemistry (coupled cluster) methods. Although kernel-based methods are exceedingly accurate, they are often less efficient than NN. We will collaborate with other projects to recast the on-the-fly trained FF into NN potentials to address this issue.
In the second funding period, the project is structured around four principal components:
Δ-Learning Beyond Local Density Functional Theory:
Significant progress was made in the first funding period by integrating the random phase approximation (RPA) with machine learning, yielding improved agreement with experimental data for various materials, including surface science applications. To enhance robustness, the approach will be refined by adopting message-passing neural networks, which are less data-intensive than kernel-based methods. This methodology will be applied to multivalent oxides, specifically iron oxides and other complex oxide surfaces. Furthermore, the project intends to explore advanced methods beyond RPA, such as coupled cluster and auxiliary field quantum Monte Carlo methods.
Transition from Kernel-Based Methods to Message-Passing Networks:
Equivariant message-passing networks demonstrate substantial accuracy gains over traditional approaches, albeit at a higher computational cost, necessitating GPU-based computations. The utilization of graph-ACE (atomic cluster expansion) is expected to advance the learning of force fields for complex materials, the differentiation between RPA and DFT, and the learning of tensorial quantities. A transition to graph-ACE will occur whenever the current methodology exhibits unsatisfactory accuracy.
Learning Polarization, Polarizabilities, and Simulating IR Spectra:
During the first funding period, polipy4vasp was developed for predicting IR spectra. While prediction accuracy for polarization and electric field gradient (NMR data) is generally very good to excellent across many systems, challenges persist. Kernel-based methods encounter some difficulties in learning tensorial quantities. Plans include improving accuracy through the use of higher-order body descriptors and ACE. Additionally, the project aims to explore advanced message-passing approaches like graph-ACE and migrate to contemporary software platforms such as PyTorch. Finally, training will be conducted on the electrical enthalpy and its derivatives.
Bayesian Regression and Global Optimization:
Active learning strategies, including Bayesian regression, are routinely and reliably employed. However, the predicted errors occasionally display an unsatisfactory distribution, which is partly attributed to the use of local descriptors. The project will investigate global descriptors to mitigate prediction errors and generate more accurate error estimates that align with expected distributions. This refined methodology will extend and enhance the active learning strategy, increasing its robustness. We also plan to implement global optimization strategies based on Bayesian regression and global descriptor-based force fields.
Expertise
The main research efforts of the group are directed towards the development of quantum-mechanical tools for atomic-scale simulations of properties and processes in materials and the application of these methodologies to key areas of condensed matter physics and materials research. An important pillar of the research is the Vienna Ab initio Simulation Package (VASP), a general-purpose ab initio code for solving the many-electron Schrödinger equation. The code is among the world leaders in its field, with more than 3500 licensees worldwide. We have expertise with simulations for a vast number of properties using many different techniques:
- Density functional theory (DFT), including spin and non-collinear DFT
- Linear response theory to calculate phonons and dielectric properties
- Hartree-Fock techniques and many flavors of hybrid functionals
- Many-body perturbation theory, including GW and Bethe-Salpeter
- Wavefunction-based correlated methods (Møller-Plesset perturbation theory)
- Surface science, including growth and oxide formation
- Simulation of nanostructures
- Semiconductor physics: charge trapping, polarons
- Electronic excitations
- Defect energies in extended systems
For TACO, we will adapt our machine-learning techniques to tensorial properties and correlated wavefunction techniques. These techniques are directly integrated into VASP and allow to accelerate finite-temperature simulations by many orders of magnitudes.
Team
Former Members
Publications
2023

Ranalli, Luigi; Verdi, Carla; Monacelli, Lorenzo; Kresse, Georg; Calandra, Matteo; Franchini, Cesare
Journal ArticleOpen AccessIn: Advanced Quantum Technology, vol. 6, iss. 4, 2023.
Abstract | Links | BibTeX | Tags: P03, P07
@article{Ranalli2023,
title = {Temperature-dependent anharmonic phonons in quantum paraelectric KTaO_{3} by first principles and machine-learned force fields},
author = {Luigi Ranalli and Carla Verdi and Lorenzo Monacelli and Georg Kresse and Matteo Calandra and Cesare Franchini},
doi = {10.1002/qute.202200131},
year = {2023},
date = {2023-02-22},
urldate = {2023-02-22},
journal = {Advanced Quantum Technology},
volume = {6},
issue = {4},
abstract = {Understanding collective phenomena in quantum materials from first principles is a promising route toward engineering materials properties and designing new functionalities. This work examines the quantum paraelectric state, an elusive state of matter characterized by the smooth saturation of the ferroelectric instability at low temperature due to quantum fluctuations associated with anharmonic phonon effects. The temperature-dependent evolution of the soft ferroelectric phonon mode in the quantum paraelectric KTaO_{3} in the range 0–300 K is modeled by combining density functional theory (DFT) calculations with the stochastic self-consistent harmonic approximation assisted by an on-the-fly machine-learned force field. The calculated data show that including anharmonic terms is essential to stabilize the spurious imaginary ferroelectric phonon predicted by DFT in the harmonic approximation, in agreement with experiments. Augmenting the DFT workflow with machine-learned force fields allows for efficient stochastic sampling of the configuration space using large supercells in a wide temperature range, inaccessible to conventional ab initio protocols. This work proposes a robust computational workflow capable of accounting for collective behaviors involving different degrees of freedom and occurring at large time/length scales, paving the way for precise modeling and control of quantum effects in materials.},
keywords = {P03, P07},
pubstate = {published},
tppubtype = {article}
}

Liu, Peitao; Wang, Jiantao; Avargues, Noah; Verdi, Carla; Singraber, Andreas; Karsai, Ferenc; Chen, Xing-Qiu; Kresse, Georg
Journal ArticleIn: Physical Review Letters, vol. 130, no. 7, pp. 078001, 2023.
Abstract | Links | BibTeX | Tags: P03
@article{Liu2023,
title = {Combining Machine Learning and Many-Body Calculations: Coverage-Dependent Adsorption of CO on Rh(111)},
author = {Peitao Liu and Jiantao Wang and Noah Avargues and Carla Verdi and Andreas Singraber and Ferenc Karsai and Xing-Qiu Chen and Georg Kresse},
doi = {10.1103/physrevlett.130.078001},
year = {2023},
date = {2023-02-17},
urldate = {2023-02-01},
journal = {Physical Review Letters},
volume = {130},
number = {7},
pages = {078001},
publisher = {American Physical Society (APS)},
abstract = {Adsorption of carbon monoxide (CO) on transition-metal surfaces is a prototypical process in surface sciences and catalysis. Despite its simplicity, it has posed great challenges to theoretical modeling. Pretty much all existing density functionals fail to accurately describe surface energies and CO adsorption site preference as well as adsorption energies simultaneously. Although the random phase approximation (RPA) cures these density functional theory failures, its large computational cost makes it prohibitive to study the CO adsorption for any but the simplest ordered cases. Here, we address these challenges by developing a machine-learned force field (MLFF) with near RPA accuracy for the prediction of coverage-dependent adsorption of CO on the Rh(111) surface through an efficient on-the-fly active learning procedure and a Δ-machine learning approach. We show that the RPA-derived MLFF is capable to accurately predict the Rh(111) surface energy and CO adsorption site preference as well as adsorption energies at different coverages that are all in good agreement with experiments. Moreover, the coverage-dependent ground-state adsorption patterns and adsorption saturation coverage are identified.},
keywords = {P03},
pubstate = {published},
tppubtype = {article}
}
2022

Tröster, Andreas; Verdi, Carla; Dellago, Christoph; Rychetsky, Ivan; Kresse, Georg; Schranz, Wilfried
Hard antiphase domain boundaries in strontium titanate unravelled using machine-learned force fields
Journal ArticleIn: Physical Review Materials, vol. 6, no. 9, pp. 094408, 2022.
Abstract | Links | BibTeX | Tags: P03, P12
@article{Troester2022,
title = {Hard antiphase domain boundaries in strontium titanate unravelled using machine-learned force fields},
author = {Andreas Tröster and Carla Verdi and Christoph Dellago and Ivan Rychetsky and Georg Kresse and Wilfried Schranz},
doi = {10.1103/physrevmaterials.6.094408},
year = {2022},
date = {2022-09-16},
urldate = {2022-09-16},
journal = {Physical Review Materials},
volume = {6},
number = {9},
pages = {094408},
publisher = {American Physical Society (APS)},
abstract = {We investigate the properties of hard antiphase boundaries in SrTiO_{3} using machine-learned force fields. In contrast to earlier findings based on standard \textit{ab initio} methods, for all pressures up to 120kbar the observed domain wall pattern maintains an almost perfect Néel character in quantitative agreement with Landau-Ginzburg-Devonshire theory, and the in-plane polarization P_{3} shows no tendency to decay to zero. Together with the switching properties of P_{3} under reversal of the Néel order parameter component, this provides hard evidence for the presence of rotopolar couplings. The present approach overcomes the severe limitations of \textit{ab initio} simulations of wide domain walls and opens avenues toward concise atomistic predictions of domain-wall properties even at finite temperatures.},
keywords = {P03, P12},
pubstate = {published},
tppubtype = {article}
}

Liu, Peitao; Verdi, Carla; Karsai, Ferenc; Kresse, Georg
Phase transitions of zirconia: Machine-learned force fields beyond density functional theory
Journal ArticleIn: Physical Review B, vol. 105, no. 6, pp. L060102, 2022.
Abstract | Links | BibTeX | Tags: P03
@article{Liu2022,
title = {Phase transitions of zirconia: Machine-learned force fields beyond density functional theory},
author = {Peitao Liu and Carla Verdi and Ferenc Karsai and Georg Kresse},
doi = {10.1103/physrevb.105.l060102},
year = {2022},
date = {2022-02-16},
journal = {Physical Review B},
volume = {105},
number = {6},
pages = {L060102},
publisher = {American Physical Society (APS)},
abstract = {Machine-learned force fields (MLFFs) are increasingly used to accelerate first-principles simulations of many materials properties. However, MLFFs are generally trained from density functional theory (DFT) data and thus suffer from the same limitations as DFT. To achieve more predictive accuracy, MLFFs based on higher levels of theory are required, but the training becomes exceptionally arduous. Here, we present an approach to generate MLFFs with beyond DFT accuracy which combines an efficient on-the-fly active learning method and Δ-machine learning. Using this approach, we generate an MLFF for zirconia based on the random phase approximation (RPA). Specifically, an MLFF trained on the fly during DFT-based molecular dynamics simulations is corrected by another MLFF that is trained on the differences between RPA and DFT calculated energies, forces, and stress tensors. We show that owing to the relatively smooth nature of these differences, the expensive RPA calculations can be performed only on a small number of representative structures of small unit cells selected by rank compression of the kernel matrix. This dramatically reduces the computational cost and allows one to generate an MLFF fully capable of reproducing high-level quantum-mechanical calculations beyond DFT. We carefully validate our approach and demonstrate its success in studying the phase transitions of zirconia. These results open the way to many-body calculations of finite-temperature properties of materials.},
keywords = {P03},
pubstate = {published},
tppubtype = {article}
}
2021

Verdi, Carla; Karsai, Ferenc; Liu, Peitao; Jinnouchi, Ryosuke; Kresse, Georg
Journal ArticleOpen AccessIn: npj Computational Materials, vol. 7, pp. 156, 2021.
Abstract | Links | BibTeX | Tags: P03
@article{Verdi2021,
title = {Thermal transport and phase transitions of zirconia by on-the-fly machine-learned interatomic potentials},
author = {Carla Verdi and Ferenc Karsai and Peitao Liu and Ryosuke Jinnouchi and Georg Kresse},
doi = {10.1038/s41524-021-00630-5},
year = {2021},
date = {2021-09-30},
urldate = {2021-09-30},
journal = {npj Computational Materials},
volume = {7},
pages = {156},
publisher = {Springer Science and Business Media LLC},
abstract = {Machine-learned interatomic potentials enable realistic finite temperature calculations of complex materials properties with first-principles accuracy. It is not yet clear, however, how accurately they describe anharmonic properties, which are crucial for predicting the lattice thermal conductivity and phase transitions in solids and, thus, shape their technological applications. Here we employ a recently developed on-the-fly learning technique based on molecular dynamics and Bayesian inference in order to generate an interatomic potential capable to describe the thermodynamic properties of zirconia, an important transition metal oxide. This machine-learned potential accurately captures the temperature-induced phase transitions below the melting point. We further showcase the predictive power of the potential by calculating the heat transport on the basis of Green–Kubo theory, which allows to account for anharmonic effects to all orders. This study indicates that machine-learned potentials trained on the fly offer a routine solution for accurate and efficient simulations of the thermodynamic properties of a vast class of anharmonic materials.},
keywords = {P03},
pubstate = {published},
tppubtype = {article}
}
